FROM java:8

MAINTAINER "Spencer Bliven"

RUN apt-get -y clean && apt-get -y update && apt-get -y update && apt-get install -y --fix-missing git maven

RUN update-alternatives --set java /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/java

WORKDIR /usr/src

RUN git clone "https://github.com/biojava/biojava" biojava

RUN git clone "https://github.com/biojava/biojava-http" biojava-http

WORKDIR /usr/src/biojava

RUN mvn install -DskipTests

WORKDIR /usr/src/biojava-http

RUN mvn install -DskipTests

EXPOSE 8080

CMD java -jar target/biojava-http-full*.jar