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Commits on Jun 15, 2016

• [maven-release-plugin]prepare release biojava-4.2.2

  

  Jenkins

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  a74758c

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• [maven-release-plugin] rollback the release of biojava-4.2.2

  

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  ebacfd7

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• [maven-release-plugin]prepare for next development iteration

  

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  f12dad9

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• [maven-release-plugin]prepare release biojava-4.2.2

  

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  1dfb457

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• [maven-release-plugin] rollback the release of biojava-4.2.2

  

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  1648288

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• [maven-release-plugin]prepare release biojava-4.2.2

  

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Commits on Jun 14, 2016

• Merge pull request #504 from andreasprlic/bugfixes-4.2

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  josemduarte

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  fbca778

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• Merge pull request #507 from sbliven/pointgroups2

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  andreasprlic

  authored
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• Use all repeats to calculate hierarchical axes in internal symmetry

  lafita

  committed
  a07102d

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• Merge branch 'pointgroups2' of https://github.com/sbliven/biojava-sbliven.git into pointgroups2

  lafita

  committed
  881bda5

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• Commit local changes

  lafita

  committed
  b61555a

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• Fix bug with >3-level deep axes

  sbliven

  committed
  c34ab21

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• Fix bug with >3-level deep axes

  sbliven

  committed
  eae3337

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Commits on Jun 13, 2016

• Storing PdbCode in BioAssemblyIdentifier cannonical representation

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  sbliven

  committed
  4bba30b

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• Avoid renaming chains when dividing structure into repeats

  lafita

  committed
  3fb85a2

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• Do not divide internal repeats into chains to calculate QS

  lafita

  committed
  9a24074

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• Handle short structures in the CeSymm iteration

  lafita

  committed
  07fe43b

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• Adapt CeSymm code to new SymmetryAxes API

  lafita

  committed
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Commits on Jun 10, 2016

• removing method that is not in biojava 4.2

  andreasprlic

  committed
  a27b4c7

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• Adds a new definitions file so the code can correctly detect Metal bonds. Slightly more efficient representation of standard amino acids.

  andreasprlic

  committed
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• merging in fixes related to PTMs into bug fix branch

  andreasprlic

  committed
  849001f

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Commits on Jun 8, 2016

• Fix bug with open symmetry axis reconstruction

  sbliven

  committed
  cd7c304

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Commits on Jun 7, 2016

• Fix chain ID duplication bug in repeats alignment

  lafita

  committed
  66d8ecb

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• Fix symmetry axes position bug

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  sbliven

  committed
  58f108c

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• Add information for construction of full list of symmetry axes.

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  sbliven

  committed
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Commits on Jun 6, 2016

• Refactor SymmetryAxis class to encapsulate individual axes

  sbliven

  committed
  87586f6

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Commits on Jun 3, 2016

• Simplify SymmetryAxis implementation & fix getSymmetryAxes()

  sbliven

  committed
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• Adding TestSymmetryAxes prior to refactoring

  sbliven

  committed
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Commits on Jun 2, 2016

• Fix contiguous helices in SSE counting

  

  lafita

  authored and

  sbliven

  committed
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Commits on May 17, 2016

• Fix #378 show ligands in symmetry Jmol GUI

  lafita

  committed
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• Use all models sequentially for symmetry analysis

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  lafita

  committed
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Commits on May 3, 2016

• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
  c726b74

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• [maven-release-plugin] prepare release biojava-4.2.1

  josemduarte

  committed
  8504664

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• [maven-release-plugin] rollback the release of biojava-4.2.1

  josemduarte

  committed
  9c4091a

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• [maven-release-plugin] prepare release biojava-4.2.1

  josemduarte

  committed
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