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Commits on May 22, 2018

• Fix for #770, use LinkedHashMaps to keep order of biological assembly

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  pwrose

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  josemduarte

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Commits on May 4, 2018

• Merge pull request #768 from josemduarte/issue767

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  josemduarte

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Commits on May 3, 2018

• Cleanup and docs

  josemduarte

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• Test and fix for #767

  josemduarte

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Commits on Mar 15, 2018

• Converting junit3 to 4, thanks intellij

  josemduarte

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Commits on Mar 14, 2018

• Merge pull request #749 from josemduarte/removeV4deprecations

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  josemduarte

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• Add license to all files

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  sbliven

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Commits on Mar 12, 2018

• Merge pull request #748 from josemduarte/mavenPluginUpgrade

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  josemduarte

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• Logging and removing comments

  josemduarte

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• Removing deprecations from v4

  josemduarte

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Commits on Mar 11, 2018

• Fixing tests that were broken when running in maven

  josemduarte

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• Asserting in right order

  josemduarte

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Commits on Mar 10, 2018

• Issue with test: flushing cache before test

  josemduarte

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• Fixing the sifts test to not use external resources, #606

  josemduarte

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• Merge pull request #735 from josemduarte/cryst1ParsingIssue

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Commits on Mar 9, 2018

• Reset the QCP 2-step calculation

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  lafita

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Commits on Mar 7, 2018

• Warnings cleanup

  josemduarte

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• More specific exception

  josemduarte

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Commits on Mar 6, 2018

• A test for CRYST1 parsing issue

  josemduarte

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Commits on Jan 19, 2018

• Small refactoring for more flexible symmetry detection.

  

  Dmytro Guzenko

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Commits on Jan 16, 2018

• Added JUnit4 test method identifier.

  

  Dmytro Guzenko

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• Added a test case that exposes the bug in AFPOptimizer.

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  Dmytro Guzenko

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Commits on Dec 8, 2017

• Fixes for translate functions, similar to #715

  josemduarte

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• Fixing also Calc.transform(Structure,Matrix4d)

  josemduarte

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Commits on Dec 7, 2017

• Fix and unit test for #715

  josemduarte

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Commits on Oct 26, 2017

• Minor bugfix and some new tests for it

  josemduarte

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Commits on Sep 8, 2017

• Making it clear that the soft memory cache is a singleton

  josemduarte

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• Fix for new tests so that they don't pollute other tests

  josemduarte

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• Solving #704 and adding some tests for #703

  josemduarte

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Commits on Aug 5, 2017

• Merge remote-tracking branch 'upstream/master'

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  luke czapla

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Commits on Aug 3, 2017

• Merge branch 'master' of github.com:biojava/biojava into serialize

  lafita

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Commits on Aug 2, 2017

• Fixing test after PDB v5 remediation

  josemduarte

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Commits on Jul 31, 2017

• Full sentence revision of all JavaDoc and addition of separate error checking method

  

  luke czapla

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  luke czapla

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Commits on Jul 28, 2017

• Add a more complete check to structure serialization test

  lafita

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• Make the secondary structure objects serializable

  lafita

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