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onbiojava-4.2.8

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Commits on Jul 6, 2017

• [maven-release-plugin] prepare release biojava-4.2.8

  josemduarte

  committed
  dee8b41

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• [maven-release-plugin] rollback the release of biojava-4.2.8

  josemduarte

  committed
  7c802e0

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• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
  f7f5eec

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• [maven-release-plugin] prepare release biojava-4.2.8

  josemduarte

  committed
  9fb8fcc

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• Better http than https

  josemduarte

  committed
  a38c8c8

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• Updating ligand URLs to latest RCSB convention

  josemduarte

  committed
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Commits on Jul 5, 2017

• Fixing test after remediation

  josemduarte

  committed
  42d628d

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• Updating to latest RCSB URL

  josemduarte

  committed
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• Updating dssp urls to latest RCSB convention

  josemduarte

  committed
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Commits on Mar 8, 2017

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  714649c

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• [maven-release-plugin]prepare release biojava-4.2.7

  

  Jenkins

  committed
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Commits on Feb 18, 2017

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  2888f8f

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• [maven-release-plugin]prepare release biojava-4.2.6

  

  Jenkins

  committed
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• Catching empty coordinates earlier in quat sym detection

  josemduarte

  committed
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Commits on Feb 15, 2017

• Fix Quaternary symmetry symmetry detection bug

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  sbliven

  committed
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Commits on Feb 10, 2017

• Better rules for Quaternary symm self-alignments

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  sbliven

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Commits on Jan 21, 2017

• Now catching empty arrays in getCentroid

  josemduarte

  committed
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• Less verbose logging in AsaCalculator

  josemduarte

  committed
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• Better logging in symmetry package

  josemduarte

  committed
  7f8659a

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• Fix for #631

  josemduarte

  committed
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Commits on Dec 7, 2016

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  2a6ff38

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• [maven-release-plugin]prepare release biojava-4.2.5

  

  Jenkins

  committed
  4db2832

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Commits on Nov 23, 2016

• Adding non-standard sg check to pdb parser

  josemduarte

  committed
  2d4a720

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• Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.

  josemduarte

  committed
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• Now using the new fields from CrystalBuilder

  josemduarte

  committed
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Commits on Nov 22, 2016

• Some extra rare fields in atom_sites

  josemduarte

  committed
  1dbfcbd

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• Fixing npe introduced in last commit

  josemduarte

  committed
  b824612

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• Implementing new crystallographic metadata fields.

  josemduarte

  committed
  508e770

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• Implementing parsing of atom_sites category in mmcif parser/consumer

  josemduarte

  committed
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Commits on Sep 21, 2016

• Inserts space when altLoc is null, so that the rest of fields are properly aligned.

  

  altaite

  authored and

  josemduarte

  committed
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• FileConvert fix - added empty space if altLoc is null.

  

  altaite

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  josemduarte

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Commits on Aug 1, 2016

• Fixing cath urls according to their final layout

  josemduarte

  committed
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Commits on Jul 29, 2016

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  e2cc068

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• [maven-release-plugin]prepare release biojava-4.2.4

  

  Jenkins

  committed
  79f57d7

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• Complete new CATH file names #546 and #544

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  lafita

  authored and

  josemduarte

  committed
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