Discussions

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  Docking with a small molecule dimer

  nathankvphan started Mar 9, 2026 in General

  

  

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  Dock_runs_cleared

  Hanoriega asked Mar 8, 2026 in ROSIE · Unanswered

  

  

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  Issues using the -design_contrast -out flag

  tsamdin asked Mar 6, 2026 in RosettaScripts · Unanswered

  

  

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  RosettaCM specifications

  myriamtrrs3 asked Feb 24, 2026 in Build & Install · Unanswered

  

  

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  energy based clustering

  xavierfradera started Feb 3, 2026 in General

  

  

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  CoordinateConstraint on NZ atom fails during peptide docking

  GulmanM asked Jan 29, 2026 in Rosetta · Unanswered

  

  

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  Advice on Parameterizing N-Terminal Pyroglutamate for FlexPepDock

  LTosh124 started Jan 11, 2026 in General

  

  

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  MakeRotLib crash when generating rotamer library for beta–amino acid

  dnbadu24 started Jan 13, 2026 in General

  

  

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  Fakerotlib for NCAA Parametrization: Issues with Mainchain Scoring durin Structure Prediction

  dnbadu24 started Jan 6, 2026 in General

  

  

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  rosetta antibody design

  croshong started Dec 16, 2025 in General

  

  

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  RosettaDock-5.0: ERROR: Some of the Rosetta processes crashed!

  Ryu-yuki-res asked Sep 9, 2024 in ROSIE · Unanswered

  

  

  

  

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  "Deterministic" Fast Relax

  nathankvphan started Dec 18, 2025 in General

  

  

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  rosettadock 5

  fontainefabien-oss asked Nov 3, 2025 in ROSIE · Unanswered

  

  

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  using identify_cdr_cluster command line with pyigclassify2

  croshong asked Oct 28, 2025 in Rosetta · Unanswered

  

  

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  Specifying noncanonical pairs when using FARFAR2

  rachel-sg started Sep 27, 2024 in General

  

  

  

  

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  Request for access to PyRosetta 3 for DeepAccNet refinement

  sameknovaes asked Oct 10, 2025 in PyRosetta · Unanswered

  

  

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  Question about constraints during FastRelax for mutation studies

  brycejoh16 asked Sep 30, 2025 in Rosetta · Unanswered

  

  

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  installing pyrosetta

  najibveto asked Sep 30, 2025 in Build & Install · Unanswered

  

  

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  Rosetta module selection

  munir-yousef started Sep 25, 2025 in General

  

  

  

  

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  Possible to output ligand docked poses in mmCIF, SDF, etc?

  greg-rezo asked Sep 26, 2025 in Rosetta · Answered

  

  

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  Applying Symmetry to Fibril Structure

  msherekar started Sep 22, 2025 in General

  

  

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  ERROR: Couldn't find a freaking tree!

  mandar5335 asked Sep 15, 2025 in Rosetta · Unanswered

  

  

  

  

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  Placing the calculated unfolded state energy

  MuhammadAttaElhamouly started Dec 23, 2024 in General

  

  

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  Peptide design

  JamesRandallJR started Sep 25, 2024 in General

  

  

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  Speeding Up Rosetta Mutant Energy Calculations

  brycejoh16 asked Sep 9, 2025 in Rosetta · Unanswered

  

  

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